DNA Fingerprinting

 Definition

DNA fingerprinting (DNA profiling) is a molecular technique used to identify individuals based on unique patterns in their DNA. It analyzes highly variable regions called VNTRs (Variable Number Tandem Repeats) or STRs (Short Tandem Repeats). Developed by Sir Alec Jeffreys in 1984.

Principle

·        More than 99.9% of human DNA is identical, but repetitive DNA regions vary among individuals.

·        The number of repeat units differs from person to person.

·        These variations produce a unique DNA banding pattern for each individual (except identical twins).

Types of DNA Sequences Used

Sequence type

Characteristics

VNTRs

Long tandem repeats (10–100 bp)

STRs

Short tandem repeats (2–6 bp)

Modern forensic analysis mainly uses STR markers.

Steps of DNA Fingerprinting

1. Sample collection

DNA can be obtained from blood, hair root, saliva, semen, bone, teeth, and skin cells.

2. DNA isolation

DNA is extracted from the collected biological sample.

3. DNA amplification (PCR)

Specific STR/VNTR regions are amplified using the Polymerase Chain Reaction (PCR).

4. Restriction digestion (classical method)

Restriction enzymes cut DNA into fragments at specific sequences.

5. Gel electrophoresis

DNA fragments are separated according to size through an agarose gel.

6. Southern blotting

DNA fragments are transferred from the gel onto a nylon or nitrocellulose membrane.

7. Hybridization with labeled probes

Radioactive or fluorescent probes bind to specific repetitive DNA sequences.

8. Detection

Band patterns are visualized using autoradiography or fluorescence detection. The resulting pattern is the DNA fingerprint.

Workflow

Biological sample → DNA extraction → PCR amplification of STR/VNTR loci → Gel electrophoresis → Southern blotting → Probe hybridization → DNA fingerprint pattern

Applications

Forensic science: Identification of criminals, matching biological samples, and crime scene investigation.

Paternity and maternity testing: Establishing biological relationships and resolving inheritance disputes.

Identification of missing persons: Disaster victim identification and unknown body identification.

Medical genetics: Detection of inherited disorders and linkage analysis.

Wildlife conservation: Identification of endangered species and prevention of illegal wildlife trade.

Evolutionary and population studies: Genetic diversity analysis and human migration studies.

Advantages

·        Highly accurate

·        Requires a very small DNA sample

·        Useful even with degraded DNA

·        Fast analysis using PCR

·        High discriminatory power

Limitations

·        Identical twins have the same DNA fingerprint.

·        Contaminated samples may give misleading results.

·        Improper handling can affect accuracy.

·        Interpretation requires statistical analysis.

DNA Fingerprinting in India

The technique was developed in India by Dr. Lalji Singh, known as the Father of DNA Fingerprinting in India. He introduced DNA fingerprinting technology for forensic and paternity investigations in the country.

Important NEET Points

·        Inventor: Alec Jeffreys (1984)

·        Indian pioneer: Dr. Lalji Singh

·        Main markers used today: STRs

·        Technique involved: PCR + Gel electrophoresis

·        Classical method: Southern blotting

·        Used in: Forensics, paternity testing, and identification

Academic References

1.      Jeffreys, A. J., Wilson, V., & Thein, S. L. (1985). Hypervariable "minisatellite" regions in human DNA. Nature, 314, 67–73.

2.      Alberts, B., et al. (2022). Molecular Biology of the Cell (7th ed.). Garland Science.

3.      NCERT. (2025). Biology, Class XII. Chapter: Biotechnology and its Applications.

4.      Butler, J. M. (2015). Advanced Topics in Forensic DNA Typing: Interpretation. Academic Press.

5.      Jobling, M. A., & Gill, P. (2004). Encoded evidence: DNA in forensic analysis. Nature Reviews Genetics, 5, 739–751.

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